About Us

We are a research group focused on different aspects of neuroimaging, from microscopy to magnetic resonance imaging. As the name says we are not limited to neuroimaging but involved also in other medical imaging projects as well as translation of research into startups and other forms of inclusion in our society.

AGH Krakow

located inside the AGH campus

Relevant News
3/10/2025

Mentoring researcher in/from Syria

As part of the MICCAI-RISE program we welcome Yomna and Sana from Syria as reseacher working closely.

27/9/2023

NeuroSummerSchool

We are organizing the second summer school in Lipari (Italy) about neuroimaging, neurooncology and neuroscience

26/9/2024

MICCAI Brainlesion workshop

For the 8th time we are organizing the MICCAI workpshop on brainlesion also including the BRATS challenge

After the success of the BRIGHT-project, and our epilepsy detection in low-resource settings . We are working on a follow-up in Ghana. To have an adaptable mapping of electrodes according to the months of the infant. Reach out for Horizon, THCS, ERDERA, etc grants.
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Our Portfolio

In this section we list our publications as well as other projects

Selection Peer-reviewed journals

Graph Attention Networks for Detecting Epilepsy from EEG Signals Using Accessible Hardware in Low-Resource Settings
S Mazurek, S Moore, A Crimi
IEEE Open Journal of Engineering in Medicine and Biology, 2025

Exploiting Graph Convolutional Networks for Insightful Classification and Explanation of Traumatic Brain Injury
T Currieri, J Falcó-Roget, E Rostami, S Vitabile, A Crimi
IEEE Access, 2025

From Knowledge Generation to Knowledge Verification: Examining the BioMedical Generative Capabilities of ChatGPT
AA Hamed, A Crimi, MM Misiak, BS Lee
iScience 28 (6), 6112492

Synergistic eigenanalysis of covariance and Hessian matrices for enhanced binary classification on health datasets
A Hartoyo, J Argasiński, A Trenk, K Przybylska, A Błasiak, A Crimi
Computers in Biology and Medicine 190, 109985

Modeling the Spread of Misfolded Proteins in Alzheimer’s Disease using Higher-Order Simplicial Complex Contagion-IEEE Conference Proceedings
M Wardynski, I Iacopini, G Petri, V Latora, A Crimi, EBMC 2025

Reshaped functional connectivity gradients in acute ischemic stroke
C Koba, J Falco-Roget, A Crimi
NeuroImage: Clinical 45 (2025), 103755

End-to-end stroke imaging analysis using effective connectivity and interpretable artificial intelligence
W Ciezobka, J Falco-Roget, C Koba, A Crimi
IEEE Access 2025

Comparing structure–function relationships in brain networks using EEG and fNIRS
R Blanco, MG Preti, C Koba, DVD Ville, A Crimi
Scientific Reports 14 (1), 28976 (2024)

Investigating the interaction between EEG and fNIRS: A multimodal network analysis of brain connectivity
R Blanco, C Koba, A Crimi
Journal of Computational Science 82, 102416

Deep learning glioma grading with the tumor microenvironment analysis protocol for comprehensive learning, discovering, and quantifying microenvironmental features
M Pytlarz, K Wojnicki, P Pilanc, B Kaminska, A Crimi
Journal of Imaging Informatics in Medicine 37 (4), 1711-1727

Investigation of Energy-Efficient AI Model Architectures and Compression Techniques for “Green” Fetal Brain Segmentation
S Mazurek, M Pytlarz, S Malec, A Crimi
International Conference on Computational Science, 61-74

Explainable graph neural networks for EEG classification and seizure detection in epileptic patients
S Mazurek, R Blanco, J Falcó-Roget, A Crimi
2024 IEEE International Symposium on Biomedical Imaging (ISBI), 1-5

Functional and structural reorganization in brain tumors: a machine learning approach using desynchronized functional oscillations
J Falcó-Roget, A Cacciola, F Sambataro, A Crimi
Communications Biology 7 (1), 419

Prediction of misfolded proteins spreading in Alzheimer’s disease using machine learning and spreading models
L Gherardini, A Zajdel, L Pini, A Crimi
Cerebral Cortex 33 (24), 11471-11485

Style transfer between Microscopy and Magnetic Resonance Imaging via Generative Adversarial Network in small sample size settings
M Pytlarz, A Onicas, A Crimi
2023 IEEE International Conference on Image Processing (ICIP), 1120-1124

Community detection in brain connectomes with hybrid quantum computing
M Wierzbiński, J Falcó-Roget, A Crimi
Scientific Reports 13 (1), 3446

Structurally Constrained Effective Brain Connectivity A Crimi, L Dodero, F Sambataro, V Murino, D Sona NeuroImage 239 (1), 118288

An integrated genomic approach to dissect the genetic landscape regulating the cell-to-cell transfer of α-synuclein E Kara, A Crimi, A Wiedmer, M Emmenegger, C Manzoni, S Bandres-Ciga, ... Cell Reports 35 (10), 109189 2021

Genome-wide association study of brain connectivity changes for alzheimer’s disease SSM Elsheikh, ER Chimusa, NJ Mulder, A Crimi Nature Scientific reports 10 (1), 1-16


Software


Effconnpy 0.1.25, A package for causal inference and statistical modeling in brain time series

People

Current members.

Dr. Alessandro Crimi

Research Group leader

Szymon Mamoń

MSc student

Konrad Meling

MSc student

Jakub Mieszczak

MSc student

Nicolas Stupak

MSc student

Sana Masrani

Researcher

Yumna Alshalak

Researcher

Tiziana Currieri

Visiting Post-doc UniPa
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Contact Us

Feel free to contact us to apply for positions or establish synergetic collaborations!


Check positions on the main AGH webiste
or through programs we are used to:
                       

Our Address



AGH, University of Krakow, Aleja Adama Mickiewicza 30, 30-059 Kraków, Poland

15-20 minutes far from Krakow main station

Email Us

brainandmorelab@gmail.com

Call Us

+48 123072737